

@169

8 years 
tjniskan 
 Fixed reconstruction of epiT1rho sequence
M aedes_revision.m
M …



@168

8 years 
tjniskan 
 Fixed a bug in filling voxel ROIs. In some situations trying to fill …



@167

8 years 
tjniskan 
 Added a plugin for opening a slice in the IMTOOL gui provided by …



@166

8 years 
tjniskan 
 Fixed a confusing error message when plugin menu construction …



@165

8 years 
tjniskan 
 Fixed an issue with fsems data and multiple receivers
M …



@164

8 years 
tjniskan 
 Added option for using external regressors in …



@163

8 years 
tjniskan 
 Minor changes to partial correlation analysis
M misclib/pcorr.m …



@162

8 years 
tjniskan 
 Added function (pcorr.m) for calculating partial correlation.
 …



@161

8 years 
tjniskan 
 Added support for a certain multiecho 3D sequences in …



@160

8 years 
tjniskan 
 Detached the code for creating mosaic images from aedes_export_gui.m …



@159

8 years 
tjniskan 
 Fixed an issue with ROI templates
M aedes.m
M aedes_revision.m



@158

8 years 
tjniskan 
 Fixed a bug in vnmr_recon/epi_recon.m when saving data from …



@157

8 years 
tjniskan 
 Tried to fix some navigator echo issues in reconstructing EPIP data
…



@156

8 years 
tjniskan 
 Fixed: aedes_headerbrowser didn't open anymore after last commit.
M …



@155

8 years 
tjniskan 
 Added support for multiple monitor systems
M aedes_inputdlg.m
M …



@154

8 years 
tjniskan 
 Fixed a few bugs in aedes_readvnmr.m. The new VNMR read function …



@153

8 years 
tjniskan 
 Added support for Various EPI sequences in vnmr_recon/epi_recon.m.
…



@152

8 years 
tjniskan 
 aedes_readvnmr.m almost works with epi data...
 The ROI averages of …



@151

8 years 
tjniskan 
 Fixed: Aedes now reads DICOM files with wrong file extensions (e.g. …



@150

9 years 
tjniskan 
 Fixed a small figure resize bug in aedes_resviewer
 Added a quick …



@149

9 years 
tjniskan 
 Fixed: Mouse scroll wheel input generated errors if no data was open …



@148

9 years 
tjniskan 
 Added aedes_roifill.m for doing binary flood fill operation. This is …



@147

9 years 
tjniskan 
 Added support for Windows network paths ( server\share) to …



@146

9 years 
tjniskan 
 Renamed aedes_viewprocpar.m to aedes_headerbrowser.m, since it's now …



@145

9 years 
tjniskan 
 aedes_viewprocpar.m works now in Matlab R2007b (may work also with …



@144

9 years 
tjniskan 
 Added a first (hpopefully) working version of the VNMR procpar tool …



@143

9 years 
tjniskan 
 Fixed a bug in detecting Matlab version in aedes_resviewer.m, which …



@142

9 years 
tjniskan 
 Fixed the dotstarting plugin mfile issue in plugin subfolders.
M …



@141

9 years 
tjniskan 
 Fixed a bug that was created in the last commit. Now …



@140

9 years 
tjniskan 
 Fixed: Mfiles beginning with a dot are now ignored in the plugins …



@139

9 years 
tjniskan 
 Fixed: reading procpar files failed if any VNMR parameters contained …



@138

9 years 
tjniskan 
 Added option to VNMR preferences to use the new version of the VNMR …



@137

9 years 
tjniskan 
 Fixed: Aedes didn't detect Matlab version correctly after rotating …



@136

9 years 
tjniskan 
 Added a plugin for quickly estimating motion in fMRI data using …



@135

9 years 
tjniskan 
 Added a plugin for automatic estimation of brain mask (in rats). …



@134

9 years 
tjniskan 
 Fixed an "uitreenode" warning that gets thrown with Matlab R2008a …



@133

9 years 
tjniskan 
 Fixed the Matlab version detection bug
 Added zoom function to …



@132

9 years 
tjniskan 
 Added read support for SWIFT reconstruction files (*.sgl)
 Changed …



@131

9 years 
tjniskan 
 Fixed a bug in detecting Matlab version (starting from Matlab …



@130

9 years 
tjniskan 
 Debugging SVN postcommit hooks, no changes in this revision
M …



@129

9 years 
tjniskan 
 Added plugin for correlation mapping with filtering/other options
 …



@128

9 years 
tjniskan 
 Added first alpha version of the new VNMRdata reader …



@126

9 years 
tjniskan 
 Hotfix for plotting multivolume mosaics. Hopefully didn't break …



@124

9 years 
tjniskan 
 Fixed a bug in aedes_readfdf.m
M aedes_readfdf.m
M …



@123

9 years 
tjniskan 
 Fixed a bug in reading MATfiles
M aedes_data_read.m
M …



@122

9 years 
tjniskan 
 Fixed a small bug in aedes_readfdf
M aedes_readfdf.m
M …



@121

9 years 
tjniskan 
 Fixed contrast autobalance to work with datas that are in [0 1] …



@120

9 years 
tjniskan 
 Fixed an indexing bug in aedes_readfid when reading multireceiver …



@119

9 years 
tjniskan 
 Added support for triplereference EPI data.
 Added two new …



@118

9 years 
tjniskan 
 aedes_readfid will now chech also procpar.pelist for phasetable …



@117

9 years 
tjniskan 
 Corrected a bug in reading RARE VNMR data (fixes #20)
M …



@116

9 years 
tjniskan 
 Still iterating block size for reading long EPIdatas
M …



@115

9 years 
tjniskan 
 Changed block size for reading massive EPIdatas...
M …



@114

9 years 
tjniskan 
 Still trying to optimize EPIreading...
M aedes_readfid.m
M …



@113

9 years 
tjniskan 
 Iterating...
M aedes_readfid.m
M aedes_revision.m



@112

9 years 
tjniskan 
 Still trying to get EPI working
M aedes_readfid.m
M …



@111

9 years 
tjniskan 
 Still trying to get multireceiver EPIdata to work...
M …



@110

9 years 
tjniskan 
 Still iterating multireceiver EPIdata reading...
M …



@109

9 years 
tjniskan 
 Added blocked processing of multireceiver EPI data for memory/speed …



@108

9 years 
tjniskan 
 Still experimenting on multireceiver EPIdata...
M …



@107

9 years 
tjniskan 
 Added a simple waitbar for reading multireceiver EPIdata as it can …



@106

9 years 
tjniskan 
 Fiddling around with multireceiver EPIdata. It's much slower now …



@105

9 years 
tjniskan 
 Reference image is now removed from multireceiver EPIdata is …



@104

9 years 
tjniskan 
 Added support for multiple receiver EPI data. (EXPERIMENTAL)
M …



@103

9 years 
tjniskan 
 Added support for multiple receivers in aedes_readfid.m
 Aedes can …



@102

9 years 
tjniskan 
 Fixed a small bug in aedes_smiswrite
M aedes_smiswrite.m
M …



@101

9 years 
tjniskan 
 aedes_write_nifti now accepts logical data
M aedes_write_nifti.m …



@100

9 years 
tjniskan 
 Corrected a bug that appeared when looking at EPI time series …



@99

9 years 
tjniskan 
 Overlay clim controls are not bound to min/max values anymore
 …



@98

10 years 
tjniskan 
 3D ROIs can now be loaded on 4D datasets if the first three …



@97

10 years 
tjniskan 
 Fixed a small bug in overlay handling.
 When loading a ROI from …



@96

10 years 
tjniskan 
 Added a possibility of loading ROIs in NIfTI file format.
 Added …



@95

10 years 
tjniskan 
 Fixed a (regression) bug in aedes_readfid.m
M aedes_readfid.m
M …



@94

10 years 
tjniskan 
 Fixed a bug in reading Varian FIDfiles (regression bug)
 Added a …



@93

10 years 
tjniskan 
 Added (again) some more "chewing gum and ironwire" in …



@92

10 years 
tjniskan 
 Fixed a small bug in the roi averages plugin.
M …



@91

10 years 
tjniskan 
 Added a plugin for calculating and plotting the average time series …



@90

10 years 
tjniskan 
 Modified the fMRI plugin to show trends over the ROI time series and …



@89

10 years 
tjniskan 
 Added a small patch for certain fsems data.
M aedes_readfid.m
M …



@88

10 years 
tjniskan 
 Added a small plugin for displaying data and ROI histograms.
A …



@87

10 years 
tjniskan 
 Fixed another small bug in plugins/fat_analysis.m
M …



@86

10 years 
tjniskan 
 Fixed a image scaling bug in fat analysis plugin
M …



@85

10 years 
tjniskan 
 Fixed a small bug (that was introduced in the last commit) in …



@84

10 years 
tjniskan 
 Added some memory optimizations for handling large EPI datas
M …



@83

10 years 
tjniskan 
 A small bug fix to misclib/fmri_analysis.m
 Made the figure a bit …



@82

10 years 
tjniskan 
 Some minor modifications to aedes_readfid.m
 Added BOLD strength …



@81

10 years 
tjniskan 
 Added (again) some "chewing gum and ironwire" into aedes_readfid.m. …



@80

10 years 
tjniskan 
 Changed the historical "an2_" prefix to "aedes_" in all files. NOTE: …


copied from an2_revision.m:



@79

10 years 
tjniskan 
 Fixed the resting state fMRI plugin to work with 3D data
M …
